petab.composite_problem

PEtab problems consisting of multiple models

Classes

CompositeProblem(parameter_df, problems)

Representation of a PEtab problem consisting of multiple models

class petab.composite_problem.CompositeProblem(parameter_df: Optional[pandas.core.frame.DataFrame] = None, problems: Optional[List[petab.problem.Problem]] = None)[source]

Bases: object

Representation of a PEtab problem consisting of multiple models

problems

List of petab.Problem s

parameter_df

PEtab parameter DataFrame

static from_yaml(yaml_config: Union[Dict, str])petab.composite_problem.CompositeProblem[source]

Create from YAML file

Factory method to create a CompositeProblem instance from a PEtab YAML config file

Parameters

yaml_config – PEtab configuration as dictionary or YAML file name