petab.visualize.data_overview

Functions for creating an overview report of a PEtab problem

Functions

create_report(problem, model_name[, output_path])

Create an HTML overview data / model overview report

get_data_per_observable(measurement_df)

Get table with number of data points per observable and condition
petab.visualize.data_overview.create_report(problem: Problem, model_name: str, output_path: str | Path = '') → None[source]

Create an HTML overview data / model overview report

Parameters:

  • problem – PEtab problem

  • model_name – Name of the model, used for file name for report

  • output_path – Output directory